Andrew Mason

University of York

Interests

I work with large public and restricted access datasets in the human and avian omics fields, and work closely with wet lab colleagues to generate new, hypothesis-driven data. My research has benefited a lot from working with these data, but it’s not always straightforward. I want to help researchers across the life sciences benefit from these data as well, especially if they are wet lab focused. I want to give researchers the skills to identify relevant datasets, ensure those data are suitable in their research or student supervisions, and to better understand the requirements for managing a new cohort of sensitive data. As a proleptic lecturer, I am also very well-placed to introduce data management and FAIR concepts into biological undergraduate teaching and projects.

My work

I am a Research Fellow and Proleptic Lecturer in Cancer Informatics in the Department of Biology and York Biomedical Research Institute at The University of York. I am the PI of a small, bioinformatics-focused research group, within a cancer unit funded by the local charity York Against Cancer. I am interested in genomic and transcriptomic dysregulation in diverse cancers. I mainly study urothelial carcinoma, including as a bioinformatic lead in the bladder cancer group of the Genomics England 100,000 Genomes Project. I am, however, interested in diverse cancers, including retroviral-induced disease in chickens, which follows on from my PhD and initial postdoctoral research. I supervise undergraduate, masters-level and PhD students, and work closely with wet lab-focused researchers in generating, storing and analysing high-throughput sequencing data from both short read and long read technologies. I am interested in training these predominantly wet lab researchers to identify, QC and utilise existing public and restricted access datasets to enhance their specific areas of research.

Online presence

Github

Institutional page

ORCID page

Follow Andrew on Twitter @asmasonomics